Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THYM rs10845744 chr12:13464401 A/G 0.00015 119 44.38 35 25.48 KM Plot
THYM rs10849417 chr12:761560 A/T 7.09E-5 119 25.83 40.78 42.33 KM Plot
THYM rs10851906 chr15:78774676 A/G 3.52E-5 118 42.82 46.6 26 KM Plot
THYM rs10858443 chr12:86967278 T/G 0 119 38.13 59.63 4.13 KM Plot
THYM rs10858445 chr12:86977825 A/G 0 119 38.13 59.63 4.13 KM Plot
THYM rs10866927 chr8:1400221 A/G 3.72E-7 119 8.5 38.9 45.87 KM Plot
THYM rs10892495 chr11:119803564 C/G 1.28E-8 119 39.75 49.77 12.63 KM Plot
THYM rs10892496 chr11:119803839 A/C 1.28E-8 119 39.75 49.77 12.63 KM Plot
THYM rs10892497 chr11:119804776 C/T 1.21E-8 119 39.75 49.77 12.63 KM Plot
THYM rs10893414 chr11:125574952 A/G 0.000188 119 44.38 35.67 23.42 KM Plot
THYM rs10893418 chr11:125582428 G/A 0.000188 119 44.38 35.67 23.42 KM Plot
THYM rs10900023 chr10:44829089 G/T 1.62E-8 116 40.67 44.83 12.63 KM Plot
THYM rs10915001 chr1:35106969 C/T 8.62E-13 117 42.82 38.38 12.63 KM Plot
THYM rs10916099 chr1:227370578 C/T 0.000123 119 19.63 37.13 42.82 KM Plot
THYM rs10919412 chr1:162388864 C/A 0.000129 119 46.6 30.55 29.72 KM Plot